HL_9O3W_087

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

UCAGGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|S2|U|416
9O3W|1|S2|C|417
9O3W|1|S2|A|418
9O3W|1|S2|G|419
9O3W|1|S2|G|420
9O3W|1|S2|G|421

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SC

Small ribosomal subunit protein uS5

Chain SJ

Small ribosomal subunit protein uS4

Chain SL

Small ribosomal subunit protein uS17

Chain SW

Small ribosomal subunit protein uS8