HL_9O3Y_024

3D structure

PDB id

9O3Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GCCGAAACGAU

Length

11 nucleotides

Bulged bases

9O3Y|1|L5|A|1766

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3Y|1|L5|G|1761
9O3Y|1|L5|C|1762
9O3Y|1|L5|C|1763
9O3Y|1|L5|G|1764
9O3Y|1|L5|A|1765
9O3Y|1|L5|A|1766
9O3Y|1|L5|A|1767
9O3Y|1|L5|C|1768
9O3Y|1|L5|G|1769
9O3Y|1|L5|A|1770
9O3Y|1|L5|U|1771

Current chains

Chain L5

28S rRNA

Nearby chains

Chain SP

Small ribosomal subunit protein uS19

Chain SS

Small ribosomal subunit protein uS13