HL_9OV6_008

3D structure

PDB id

9OV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

GGAAAUGAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OV6_008 not in the Motif Atlas

Geometric match to HL_2A64_005

Geometric discrepancy: 0.307

The information below is about HL_2A64_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48408.1

Basepair signature

cWW-tSH-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9OV6|1|A|G|288
9OV6|1|A|G|289
9OV6|1|A|A|290
9OV6|1|A|A|291
9OV6|1|A|A|292
9OV6|1|A|U|293
9OV6|1|A|G|294
9OV6|1|A|A|295
9OV6|1|A|A|296
9OV6|1|A|C|297

Current chains

Chain A

RNase P RNA component

Nearby chains