HL_9OV8_006

3D structure

PDB id

9OV8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

9OV8|1|A|A|216

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OV8_006 not in the Motif Atlas

Homologous match to HL_1NBS_007

Geometric discrepancy: 0.3829

The information below is about HL_1NBS_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9OV8|1|A|G|214
9OV8|1|A|G|215
9OV8|1|A|A|216
9OV8|1|A|A|217
9OV8|1|A|A|218
9OV8|1|A|C|219

Current chains

Chain A

RNase P RNA component

Nearby chains