HL_9OVB_001

3D structure

PDB id

9OVB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in 5 mM Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

GGUUUC

Length

6 nucleotides

Bulged bases

9OVB|1|A|U|34, 9OVB|1|A|U|35

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OVB_001 not in the Motif Atlas

Geometric match to HL_8CRE_220

Geometric discrepancy: 0.325

The information below is about HL_8CRE_220

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.4

Basepair signature

cWW-F-F

Number of instances in this motif group

20

Unit IDs

9OVB|1|A|G|31
9OVB|1|A|G|32
9OVB|1|A|U|33
9OVB|1|A|U|34
9OVB|1|A|U|35
9OVB|1|A|C|36

Current chains

Chain A

RNase P RNA component

Nearby chains