HL_9OVC_002

3D structure

PDB id

9OVC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in 10 mM Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CUGAGAUG

Length

8 nucleotides

Bulged bases

9OVC|1|A|U|75

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OVC_002 not in the Motif Atlas

Geometric match to HL_8B0X_041

Geometric discrepancy: 0.1

The information below is about HL_8B0X_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13999.5

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

24

Unit IDs

9OVC|1|A|C|69
9OVC|1|A|U|70
9OVC|1|A|G|71
9OVC|1|A|A|72
9OVC|1|A|G|73
9OVC|1|A|A|74
9OVC|1|A|U|75
9OVC|1|A|G|76

Current chains

Chain A

RNase P ribozyme

Nearby chains