HL_9OWJ_010

3D structure

PDB id

9OWJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 5 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CGCAAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OWJ_010 not in the Motif Atlas

Geometric match to HL_3IVK_005

Geometric discrepancy: 0.3664

The information below is about HL_3IVK_005

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_67772.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

9OWJ|1|A|C|359
9OWJ|1|A|G|360
9OWJ|1|A|C|361
9OWJ|1|A|A|362
9OWJ|1|A|A|363
9OWJ|1|A|A|364
9OWJ|1|A|G|365

Current chains

Chain A

RNase P RNA component

Nearby chains