HL_9OWO_004

3D structure

PDB id

9OWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5' leader (sub-conformation 1 of tRNA anticodon arm tilted)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CUUUGG

Length

6 nucleotides

Bulged bases

9OWO|1|A|U|126

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OWO_004 not in the Motif Atlas

Geometric match to HL_7EL1_002

Geometric discrepancy: 0.285

The information below is about HL_7EL1_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_21043.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

9OWO|1|A|C|123
9OWO|1|A|U|124
9OWO|1|A|U|125
9OWO|1|A|U|126
9OWO|1|A|G|127
9OWO|1|A|G|128

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains