HL_9OWV_012

3D structure

PDB id

9OWV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with mature tRNA in 5 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

UUGCCAA

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OWV_012 not in the Motif Atlas

Homologous match to HL_9J5P_002

Geometric discrepancy: 0.3644

The information below is about HL_9J5P_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37569.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

9OWV|1|C|U|31
9OWV|1|C|U|32
9OWV|1|C|G|33
9OWV|1|C|C|34
9OWV|1|C|C|35
9OWV|1|C|A|36
9OWV|1|C|A|37

Current chains

Chain C

mature tRNA (75-MER)

Nearby chains