HL_9OY3_006

3D structure

PDB id

9OY3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GUUUUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OY3_006 not in the Motif Atlas

Homologous match to HL_1NBS_007

Geometric discrepancy: 0.3604

The information below is about HL_1NBS_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9OY3|1|A|G|214
9OY3|1|A|U|215
9OY3|1|A|U|216
9OY3|1|A|U|217
9OY3|1|A|U|218
9OY3|1|A|C|219

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains