HL_9OY3_010

3D structure

PDB id

9OY3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGCAAAG

Length

7 nucleotides

Bulged bases

9OY3|1|A|C|361

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OY3_010 not in the Motif Atlas

Geometric match to HL_4V9F_070

Geometric discrepancy: 0.2562

The information below is about HL_4V9F_070

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9OY3|1|A|C|359
9OY3|1|A|G|360
9OY3|1|A|C|361
9OY3|1|A|A|362
9OY3|1|A|A|363
9OY3|1|A|A|364
9OY3|1|A|G|365

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains