HL_9P6Z_045

3D structure

PDB id

9P6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GGUUCC

Length

6 nucleotides

Bulged bases

9P6Z|1|L5|U|2707, 9P6Z|1|L5|U|2708, 9P6Z|1|L5|C|2709

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P6Z|1|L5|G|2705
9P6Z|1|L5|G|2706
9P6Z|1|L5|U|2707
9P6Z|1|L5|U|2708
9P6Z|1|L5|C|2709
9P6Z|1|L5|C|2710

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CI

Transcription factor BTF3

Chain LR

60S ribosomal protein L19