HL_9P72_029
3D structure
- PDB id
- 9P72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UUGGGGCCGAAACGAUCUCA
- Length
- 20 nucleotides
- Bulged bases
- 9P72|1|L5|U|1757, 9P72|1|L5|C|1763, 9P72|1|L5|A|1765, 9P72|1|L5|A|1766, 9P72|1|L5|A|1767, 9P72|1|L5|G|1769
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P72|1|L5|U|1756
9P72|1|L5|U|1757
9P72|1|L5|G|1758
9P72|1|L5|G|1759
9P72|1|L5|G|1760
9P72|1|L5|G|1761
9P72|1|L5|C|1762
9P72|1|L5|C|1763
9P72|1|L5|G|1764
9P72|1|L5|A|1765
9P72|1|L5|A|1766
9P72|1|L5|A|1767
9P72|1|L5|C|1768
9P72|1|L5|G|1769
9P72|1|L5|A|1770
9P72|1|L5|U|1771
9P72|1|L5|C|1772
9P72|1|L5|U|1773
9P72|1|L5|C|1774
9P72|1|L5|A|1775
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LD
- Large ribosomal subunit protein uL18
- Chain LI
- Ribosomal protein uL16-like
- Chain SP
- Small ribosomal subunit protein uS19
- Chain SS
- 40S ribosomal protein S18
Coloring options: