HL_9P72_126

3D structure

PDB id

9P72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGUCGGCCCACGGC

Length

14 nucleotides

Bulged bases

9P72|1|S2|G|1760, 9P72|1|S2|C|1762, 9P72|1|S2|G|1763, 9P72|1|S2|G|1764, 9P72|1|S2|C|1765, 9P72|1|S2|C|1766, 9P72|1|S2|C|1767, 9P72|1|S2|A|1768, 9P72|1|S2|C|1769, 9P72|1|S2|G|1770, 9P72|1|S2|G|1771

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P72|1|S2|G|1759
9P72|1|S2|G|1760
9P72|1|S2|U|1761
9P72|1|S2|C|1762
9P72|1|S2|G|1763
9P72|1|S2|G|1764
9P72|1|S2|C|1765
9P72|1|S2|C|1766
9P72|1|S2|C|1767
9P72|1|S2|A|1768
9P72|1|S2|C|1769
9P72|1|S2|G|1770
9P72|1|S2|G|1771
9P72|1|S2|C|1772

Current chains

Chain S2

18S rRNA

Nearby chains