HL_9P73_003
3D structure
- PDB id
- 9P73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human eEF2-A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- GUUCGAAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P73_003 not in the Motif Atlas
- Homologous match to HL_7UZ0_003
- Geometric discrepancy: 0.1869
- The information below is about HL_7UZ0_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
9P73|1|AP|G|53
9P73|1|AP|U|54
9P73|1|AP|U|55
9P73|1|AP|C|56
9P73|1|AP|G|57
9P73|1|AP|A|58
9P73|1|AP|A|59
9P73|1|AP|A|60
9P73|1|AP|C|61
Current chains
- Chain AP
- A/P site tRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Ribosomal protein uL16-like
Coloring options: