3D structure

PDB id
9P73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human eEF2-A/P-P/E state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.66 Å

Loop

Sequence
UAUUUUGUUGGUUUUCG
Length
17 nucleotides
Bulged bases
9P73|1|S2|U|890, 9P73|1|S2|G|891, 9P73|1|S2|U|896, 9P73|1|S2|U|899
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P73|1|S2|U|885
9P73|1|S2|A|886
9P73|1|S2|U|887
9P73|1|S2|U|888
9P73|1|S2|U|889
9P73|1|S2|U|890
9P73|1|S2|G|891
9P73|1|S2|U|892
9P73|1|S2|U|893
9P73|1|S2|G|894
9P73|1|S2|G|895
9P73|1|S2|U|896
9P73|1|S2|U|897
9P73|1|S2|U|898
9P73|1|S2|U|899
9P73|1|S2|C|900
9P73|1|S2|G|901

Current chains

Chain S2
18S rRNA [Homo sapiens]

Nearby chains

Chain SG
40S ribosomal protein S6

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.1375 s