HL_9P76_060

3D structure

PDB id

9P76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human eEF1A-A/T-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

UCUAAUUAG

Length

9 nucleotides

Bulged bases

9P76|1|L5|U|3802

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P76|1|L5|U|3796
9P76|1|L5|C|3797
9P76|1|L5|U|3798
9P76|1|L5|A|3799
9P76|1|L5|A|3800
9P76|1|L5|U|3801
9P76|1|L5|U|3802
9P76|1|L5|A|3803
9P76|1|L5|G|3804

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LV

60S ribosomal protein L23

Chain S2

Small subunit ribosomal RNA; SSU rRNA