HL_9P79_008

3D structure

PDB id

9P79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUGGGAAUG

Length

10 nucleotides

Bulged bases

9P79|1|L5|G|294, 9P79|1|L5|A|295, 9P79|1|L5|A|296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P79|1|L5|C|289
9P79|1|L5|U|290
9P79|1|L5|U|291
9P79|1|L5|G|292
9P79|1|L5|G|293
9P79|1|L5|G|294
9P79|1|L5|A|295
9P79|1|L5|A|296
9P79|1|L5|U|297
9P79|1|L5|G|298

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein eL13

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Lo

60S ribosomal protein L36a