HL_9P79_040

3D structure

PDB id

9P79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUCUCUU(PSU)

Length

9 nucleotides

Bulged bases

9P79|1|L5|U|2631

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P79|1|L5|G|2624
9P79|1|L5|U|2625
9P79|1|L5|U|2626
9P79|1|L5|C|2627
9P79|1|L5|U|2628
9P79|1|L5|C|2629
9P79|1|L5|U|2630
9P79|1|L5|U|2631
9P79|1|L5|PSU|2632

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CI

Transcription factor BTF3

Chain LR

60S ribosomal protein L19

Chain LU

Heparin-binding protein HBp15