HL_9P79_092

3D structure

PDB id

9P79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACUUUAA(A2M)UCCUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P79|1|S2|A|569
9P79|1|S2|C|570
9P79|1|S2|U|571
9P79|1|S2|U|572
9P79|1|S2|U|573
9P79|1|S2|A|574
9P79|1|S2|A|575
9P79|1|S2|A2M|576
9P79|1|S2|U|577
9P79|1|S2|C|578
9P79|1|S2|C|579
9P79|1|S2|U|580
9P79|1|S2|U|581

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24