HL_9P7A_027

3D structure

PDB id

9P7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human hibernating class2 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

GGGCCGAAACGAUCU

Length

15 nucleotides

Bulged bases

9P7A|1|L5|A|1765, 9P7A|1|L5|A|1766, 9P7A|1|L5|A|1767

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7A|1|L5|G|1759
9P7A|1|L5|G|1760
9P7A|1|L5|G|1761
9P7A|1|L5|C|1762
9P7A|1|L5|C|1763
9P7A|1|L5|G|1764
9P7A|1|L5|A|1765
9P7A|1|L5|A|1766
9P7A|1|L5|A|1767
9P7A|1|L5|C|1768
9P7A|1|L5|G|1769
9P7A|1|L5|A|1770
9P7A|1|L5|U|1771
9P7A|1|L5|C|1772
9P7A|1|L5|U|1773

Current chains

Chain L5

28S rRNA

Nearby chains

Chain SP

Small ribosomal subunit protein uS19