HL_9P7A_043
3D structure
- PDB id
- 9P7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human hibernating class2 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- GUUCUCUU(PSU)
- Length
- 9 nucleotides
- Bulged bases
- 9P7A|1|L5|U|2631
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P7A_043 not in the Motif Atlas
- Homologous match to HL_9PN5_036
- Geometric discrepancy: 0.2114
- The information below is about HL_9PN5_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22758.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9P7A|1|L5|G|2624
9P7A|1|L5|U|2625
9P7A|1|L5|U|2626
9P7A|1|L5|C|2627
9P7A|1|L5|U|2628
9P7A|1|L5|C|2629
9P7A|1|L5|U|2630
9P7A|1|L5|U|2631
9P7A|1|L5|PSU|2632
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CI
- Transcription factor BTF3
- Chain LR
- 60S ribosomal protein L19
- Chain LU
- Heparin-binding protein HBp15
Coloring options: