HL_9P7D_116
3D structure
- PDB id
- 9P7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Hibernating class4 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.57 Å
Loop
- Sequence
- CGGGGUCGGCCCACGGCCCUG
- Length
- 21 nucleotides
- Bulged bases
- 9P7D|1|S2|G|1759, 9P7D|1|S2|G|1760, 9P7D|1|S2|C|1762, 9P7D|1|S2|G|1763, 9P7D|1|S2|G|1764, 9P7D|1|S2|C|1765, 9P7D|1|S2|C|1766, 9P7D|1|S2|C|1767, 9P7D|1|S2|A|1768, 9P7D|1|S2|C|1769, 9P7D|1|S2|G|1770, 9P7D|1|S2|C|1773, 9P7D|1|S2|C|1774
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P7D|1|S2|C|1756
9P7D|1|S2|G|1757
9P7D|1|S2|G|1758
9P7D|1|S2|G|1759
9P7D|1|S2|G|1760
9P7D|1|S2|U|1761
9P7D|1|S2|C|1762
9P7D|1|S2|G|1763
9P7D|1|S2|G|1764
9P7D|1|S2|C|1765
9P7D|1|S2|C|1766
9P7D|1|S2|C|1767
9P7D|1|S2|A|1768
9P7D|1|S2|C|1769
9P7D|1|S2|G|1770
9P7D|1|S2|G|1771
9P7D|1|S2|C|1772
9P7D|1|S2|C|1773
9P7D|1|S2|C|1774
9P7D|1|S2|U|1775
9P7D|1|S2|G|1776
Current chains
- Chain S2
- 18S rRNA [homo sapiens]
Nearby chains
- Chain LW
- Ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
Coloring options: