HL_9P7E_012

3D structure

PDB id

9P7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class5 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GGUAAACUCC

Length

10 nucleotides

Bulged bases

9P7E|1|L5|G|315, 9P7E|1|L5|U|316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7E|1|L5|G|314
9P7E|1|L5|G|315
9P7E|1|L5|U|316
9P7E|1|L5|A|317
9P7E|1|L5|A|318
9P7E|1|L5|A|319
9P7E|1|L5|C|320
9P7E|1|L5|U|321
9P7E|1|L5|C|322
9P7E|1|L5|C|323

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Li

60S ribosomal protein L36

Chain Lo

60S ribosomal protein L36a