HL_9P7E_040

3D structure

PDB id

9P7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class5 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GUUCAGAUCC

Length

10 nucleotides

Bulged bases

9P7E|1|L5|U|2530, 9P7E|1|L5|C|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7E|1|L5|G|2523
9P7E|1|L5|U|2524
9P7E|1|L5|U|2525
9P7E|1|L5|C|2526
9P7E|1|L5|A|2527
9P7E|1|L5|G|2528
9P7E|1|L5|A|2529
9P7E|1|L5|U|2530
9P7E|1|L5|C|2531
9P7E|1|L5|C|2532

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CA

Proliferation-associated protein 2G4

Chain LR

60S ribosomal protein L19

Chain LX

60S ribosomal protein L23a

Chain Lg

60S ribosomal protein L34