HL_9P7G_019

3D structure

PDB id

9P7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

UCUUG(1MA)(A2M)AC(A2M)

Length

10 nucleotides

Bulged bases

9P7G|1|L5|C|1325

QA status

Modified nucleotides: 1MA, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7G|1|L5|U|1317
9P7G|1|L5|C|1318
9P7G|1|L5|U|1319
9P7G|1|L5|U|1320
9P7G|1|L5|G|1321
9P7G|1|L5|1MA|1322
9P7G|1|L5|A2M|1323
9P7G|1|L5|A|1324
9P7G|1|L5|C|1325
9P7G|1|L5|A2M|1326

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain La

60S ribosomal protein L27a

Chain Le

60S ribosomal protein L32