HL_9P7G_082

3D structure

PDB id

9P7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

9P7G|1|L5|C|5023, 9P7G|1|L5|C|5024, 9P7G|1|L5|C|5027

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7G|1|L5|C|5021
9P7G|1|L5|U|5022
9P7G|1|L5|C|5023
9P7G|1|L5|C|5024
9P7G|1|L5|C|5025
9P7G|1|L5|U|5026
9P7G|1|L5|C|5027
9P7G|1|L5|G|5028

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LU

Heparin-binding protein HBp15

Chain SI

40S ribosomal protein S8