HL_9P7J_013

3D structure

PDB id

9P7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

UCG

Length

3 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9P7J_013 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.2742

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.11

Basepair signature

cWW-F

Number of instances in this motif group

25

Unit IDs

9P7J|1|L5|U|989
9P7J|1|L5|C|990
9P7J|1|L5|G|1064

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LE

Large ribosomal subunit protein eL6