HL_9P7J_056

3D structure

PDB id

9P7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

9P7J|1|L5|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7J|1|L5|G|3757
9P7J|1|L5|U|3758
9P7J|1|L5|A|3759
9P7J|1|L5|A|3760
9P7J|1|L5|C|3761
9P7J|1|L5|U|3762
9P7J|1|L5|A|3763
9P7J|1|L5|U|3764
9P7J|1|L5|G|3765
9P7J|1|L5|A|3766
9P7J|1|L5|C|3767

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain Pt

Transfer RNA; tRNA

Chain S2

Small subunit ribosomal RNA; SSU rRNA