HL_9P7J_123

3D structure

PDB id

9P7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

GGUCGGCCCACGGC

Length

14 nucleotides

Bulged bases

9P7J|1|S2|G|1760, 9P7J|1|S2|C|1762, 9P7J|1|S2|G|1763, 9P7J|1|S2|G|1764, 9P7J|1|S2|C|1765, 9P7J|1|S2|C|1766, 9P7J|1|S2|C|1767, 9P7J|1|S2|A|1768, 9P7J|1|S2|C|1769, 9P7J|1|S2|G|1770, 9P7J|1|S2|G|1771

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7J|1|S2|G|1759
9P7J|1|S2|G|1760
9P7J|1|S2|U|1761
9P7J|1|S2|C|1762
9P7J|1|S2|G|1763
9P7J|1|S2|G|1764
9P7J|1|S2|C|1765
9P7J|1|S2|C|1766
9P7J|1|S2|C|1767
9P7J|1|S2|A|1768
9P7J|1|S2|C|1769
9P7J|1|S2|G|1770
9P7J|1|S2|G|1771
9P7J|1|S2|C|1772

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains