HL_9P7K_031
3D structure
- PDB id
- 9P7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human post eEF1A-A/T-P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CC(PSU)CAG
- Length
- 6 nucleotides
- Bulged bases
- 9P7K|1|L5|C|1676, 9P7K|1|L5|A|1679
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P7K_031 not in the Motif Atlas
- Homologous match to HL_9AXU_020
- Geometric discrepancy: 0.0987
- The information below is about HL_9AXU_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27530.4
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 12
Unit IDs
9P7K|1|L5|C|1675
9P7K|1|L5|C|1676
9P7K|1|L5|PSU|1677
9P7K|1|L5|C|1678
9P7K|1|L5|A|1679
9P7K|1|L5|G|1680
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain La
- 60S ribosomal protein L27a
- Chain Lb
- Large ribosomal subunit protein eL29
- Chain Lo
- 60S ribosomal protein L36a
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