HL_9P7N_048
3D structure
- PDB id
- 9P7N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Post-eEF1A-A/T-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- GGUUCC
- Length
- 6 nucleotides
- Bulged bases
- 9P7N|1|L5|U|2707, 9P7N|1|L5|U|2708, 9P7N|1|L5|C|2709
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P7N_048 not in the Motif Atlas
- Geometric match to HL_5U3G_001
- Geometric discrepancy: 0.1
- The information below is about HL_5U3G_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.11
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 25
Unit IDs
9P7N|1|L5|G|2705
9P7N|1|L5|G|2706
9P7N|1|L5|U|2707
9P7N|1|L5|U|2708
9P7N|1|L5|C|2709
9P7N|1|L5|C|2710
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CI
- Transcription factor BTF3
- Chain LR
- 60S ribosomal protein L19
- Chain LU
- Heparin-binding protein HBp15
- Chain LX
- 60S ribosomal protein L23a
Coloring options: