3D structure

PDB id
9P7O (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human AT-P-Z state ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
UAUUUUGUUGGUUUUCG
Length
17 nucleotides
Bulged bases
9P7O|1|S2|U|890, 9P7O|1|S2|G|891, 9P7O|1|S2|U|897, 9P7O|1|S2|U|899
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P7O|1|S2|U|885
9P7O|1|S2|A|886
9P7O|1|S2|U|887
9P7O|1|S2|U|888
9P7O|1|S2|U|889
9P7O|1|S2|U|890
9P7O|1|S2|G|891
9P7O|1|S2|U|892
9P7O|1|S2|U|893
9P7O|1|S2|G|894
9P7O|1|S2|G|895
9P7O|1|S2|U|896
9P7O|1|S2|U|897
9P7O|1|S2|U|898
9P7O|1|S2|U|899
9P7O|1|S2|C|900
9P7O|1|S2|G|901

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SG
40S ribosomal protein S6

Coloring options:

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