HL_9P7W_072
3D structure
- PDB id
- 9P7W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A-P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CGUUCAUAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P7W_072 not in the Motif Atlas
- Homologous match to HL_9H3G_062
- Geometric discrepancy: 0.1556
- The information below is about HL_9H3G_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.4
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9P7W|1|L5|C|4417
9P7W|1|L5|G|4418
9P7W|1|L5|U|4419
9P7W|1|L5|U|4420
9P7W|1|L5|C|4421
9P7W|1|L5|A|4422
9P7W|1|L5|U|4423
9P7W|1|L5|A|4424
9P7W|1|L5|G|4425
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain At
- Transfer RNA; tRNA
- Chain LI
- Ribosomal protein uL16-like
- Chain Lm
- Large ribosomal subunit protein eL40
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