HL_9P7X_098

3D structure

PDB id

9P7X (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CCCCCGUG

Length

8 nucleotides

Bulged bases

9P7X|1|S2|C|324, 9P7X|1|S2|C|325

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7X|1|S2|C|322
9P7X|1|S2|C|323
9P7X|1|S2|C|324
9P7X|1|S2|C|325
9P7X|1|S2|C|326
9P7X|1|S2|G|327
9P7X|1|S2|U|328
9P7X|1|S2|G|329

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

Ribosomal protein L24

Chain SG

40S ribosomal protein S6