HL_9P8B_090
3D structure
- PDB id
- 9P8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human eEF1A-A/T-P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- G(PSU)GAAUU(OMG)CAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 9P8B|1|L8|A|82, 9P8B|1|L8|U|85
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P8B|1|L8|G|68
9P8B|1|L8|PSU|69
9P8B|1|L8|G|70
9P8B|1|L8|A|71
9P8B|1|L8|A|72
9P8B|1|L8|U|73
9P8B|1|L8|U|74
9P8B|1|L8|OMG|75
9P8B|1|L8|C|76
9P8B|1|L8|A|77
9P8B|1|L8|G|78
9P8B|1|L8|G|79
9P8B|1|L8|A|80
9P8B|1|L8|C|81
9P8B|1|L8|A|82
9P8B|1|L8|C|83
9P8B|1|L8|A|84
9P8B|1|L8|U|85
9P8B|1|L8|U|86
9P8B|1|L8|G|87
9P8B|1|L8|A|88
9P8B|1|L8|U|89
9P8B|1|L8|C|90
Current chains
- Chain L8
- 5.8S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- 60S ribosomal protein L26
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
Coloring options: