HL_9P8C_065

3D structure

PDB id

9P8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

U(OMU)(OMG)(PSU)UCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMG, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8C|1|L5|U|4497
9P8C|1|L5|OMU|4498
9P8C|1|L5|OMG|4499
9P8C|1|L5|PSU|4500
9P8C|1|L5|U|4501
9P8C|1|L5|C|4502
9P8C|1|L5|A|4503

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3