HL_9P9I_072

3D structure

PDB id

9P9I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

9P9I|1|L5|G|4475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P9I|1|L5|A|4474
9P9I|1|L5|G|4475
9P9I|1|L5|C|4476
9P9I|1|L5|A|4477
9P9I|1|L5|G|4478
9P9I|1|L5|A|4479
9P9I|1|L5|A|4480
9P9I|1|L5|U|4481

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CB

Elongation factor 2

Chain LH

60S ribosomal protein L9

Chain Lm

Large ribosomal subunit protein eL40