HL_9P9K_029
3D structure
- PDB id
- 9P9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 60S ribosome with EIF6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GGAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P9K_029 not in the Motif Atlas
- Homologous match to HL_8GLP_029
- Geometric discrepancy: 0.0455
- The information below is about HL_8GLP_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9P9K|1|L5|G|1886
9P9K|1|L5|G|1887
9P9K|1|L5|A|1888
9P9K|1|L5|U|1889
9P9K|1|L5|G|1890
9P9K|1|L5|A|1891
9P9K|1|L5|A|1892
9P9K|1|L5|C|1893
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LF
- 60S ribosomal protein L7
- Chain Le
- 60S ribosomal protein L32
- Chain Lf
- 60S ribosomal protein L35a
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