HL_9PA7_100
3D structure
- PDB id
- 9PA7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 80S consensus ribosome with EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- UCUCGGCCGGGGCCCGAA
- Length
- 18 nucleotides
- Bulged bases
- 9PA7|1|S2|G|752, 9PA7|1|S2|C|785, 9PA7|1|S2|G|786, 9PA7|1|S2|G|787, 9PA7|1|S2|C|790, 9PA7|1|S2|C|791, 9PA7|1|S2|C|792
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PA7|1|S2|U|747
9PA7|1|S2|C|748
9PA7|1|S2|U|749
9PA7|1|S2|C|750
9PA7|1|S2|G|751
9PA7|1|S2|G|752
9PA7|1|S2|C|753
9PA7|1|S2|C|785
9PA7|1|S2|G|786
9PA7|1|S2|G|787
9PA7|1|S2|G|788
9PA7|1|S2|G|789
9PA7|1|S2|C|790
9PA7|1|S2|C|791
9PA7|1|S2|C|792
9PA7|1|S2|G|793
9PA7|1|S2|A|794
9PA7|1|S2|A|795
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SG
- 40S ribosomal protein S6
- Chain SH
- Small ribosomal subunit protein eS7
Coloring options: