HL_9PG8_021

3D structure

PDB id

9PG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P-E state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

9PG8|1|A|C|2523, 9PG8|1|A|A|2527, 9PG8|1|A|U|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PG8|1|A|A|2518
9PG8|1|A|G|2519
9PG8|1|A|C|2520
9PG8|1|A|A|2521
9PG8|1|A|U|2522
9PG8|1|A|C|2523
9PG8|1|A|A|2524
9PG8|1|A|C|2525
9PG8|1|A|C|2526
9PG8|1|A|A|2527
9PG8|1|A|G|2528
9PG8|1|A|U|2529
9PG8|1|A|A|2530
9PG8|1|A|U|2531
9PG8|1|A|U|2532

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

39S ribosomal protein L2, mitochondrial