3D structure

PDB id
9PGF (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ structure of the human mitoribosome in the P state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.93 Å

Loop

Sequence
AACCCUCUAAAU
Length
12 nucleotides
Bulged bases
9PGF|1|A|U|2071
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PGF|1|A|A|2064
9PGF|1|A|A|2065
9PGF|1|A|C|2066
9PGF|1|A|C|2067
9PGF|1|A|C|2068
9PGF|1|A|U|2069
9PGF|1|A|C|2070
9PGF|1|A|U|2071
9PGF|1|A|A|2072
9PGF|1|A|A|2073
9PGF|1|A|A|2074
9PGF|1|A|U|2075

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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