HL_9PGI_065
3D structure
- PDB id
- 9PGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state with TACO1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PGI_065 not in the Motif Atlas
- Homologous match to HL_2AKE_003
- Geometric discrepancy: 0.4689
- The information below is about HL_2AKE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33239.1
- Basepair signature
- cWW-R-R-tWH-R-R-R
- Number of instances in this motif group
- 98
Unit IDs
9PGI|1|Ay|G|53
9PGI|1|Ay|U|54
9PGI|1|Ay|U|55
9PGI|1|Ay|C|56
9PGI|1|Ay|A|57
9PGI|1|Ay|A|58
9PGI|1|Ay|U|59
9PGI|1|Ay|U|60
9PGI|1|Ay|C|61
Current chains
- Chain Ay
- E/E-tRNA
Nearby chains
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
- Chain z
- Large ribosomal subunit protein uL1m
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