HL_9PGL_016
3D structure
- PDB id
- 9PGL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P state with TACO1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCACCCUA
- Length
- 8 nucleotides
- Bulged bases
- 9PGL|1|A|C|2283, 9PGL|1|A|C|2284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PGL_016 not in the Motif Atlas
- Geometric match to HL_5E6M_002
- Geometric discrepancy: 0.3144
- The information below is about HL_5E6M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55735.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9PGL|1|A|U|2279
9PGL|1|A|C|2280
9PGL|1|A|A|2281
9PGL|1|A|C|2282
9PGL|1|A|C|2283
9PGL|1|A|C|2284
9PGL|1|A|U|2285
9PGL|1|A|A|2286
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain b
- 39S ribosomal protein L43, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain h
- 39S ribosomal protein L50, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
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