HL_9PGL_050

3D structure

PDB id

9PGL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P state with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAAAUCAACAAA

Length

12 nucleotides

Bulged bases

9PGL|1|AA|A|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGL|1|AA|U|1115
9PGL|1|AA|A|1116
9PGL|1|AA|A|1117
9PGL|1|AA|A|1118
9PGL|1|AA|U|1119
9PGL|1|AA|C|1120
9PGL|1|AA|A|1121
9PGL|1|AA|A|1122
9PGL|1|AA|C|1123
9PGL|1|AA|A|1124
9PGL|1|AA|A|1125
9PGL|1|AA|A|1126

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Small ribosomal subunit protein mS37

Chain AB

28S ribosomal protein S2, mitochondrial

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AS

28S ribosomal protein S23, mitochondrial