HL_9PGM_028
3D structure
- PDB id
- 9PGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.18 Å
Loop
- Sequence
- GCAGAACCCAACC
- Length
- 13 nucleotides
- Bulged bases
- 9PGM|1|A|G|2831, 9PGM|1|A|A|2832, 9PGM|1|A|C|2839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PGM|1|A|G|2828
9PGM|1|A|C|2829
9PGM|1|A|A|2830
9PGM|1|A|G|2831
9PGM|1|A|A|2832
9PGM|1|A|A|2833
9PGM|1|A|C|2834
9PGM|1|A|C|2835
9PGM|1|A|C|2836
9PGM|1|A|A|2837
9PGM|1|A|A|2838
9PGM|1|A|C|2839
9PGM|1|A|C|2840
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
Coloring options: