HL_9PIH_095
3D structure
- PDB id
- 9PIH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome bound to Doxycycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAAGACGAC
- Length
- 9 nucleotides
- Bulged bases
- 9PIH|1|a|A|2820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PIH_095 not in the Motif Atlas
- Homologous match to HL_7A0S_067
- Geometric discrepancy: 0.1856
- The information below is about HL_7A0S_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37889.2
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9PIH|1|a|G|2819
9PIH|1|a|A|2820
9PIH|1|a|A|2821
9PIH|1|a|G|2822
9PIH|1|a|A|2823
9PIH|1|a|C|2824
9PIH|1|a|G|2825
9PIH|1|a|A|2826
9PIH|1|a|C|2827
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain m
- Large ribosomal subunit protein bL17
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