3D structure

PDB id
9PIJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome bound to Minocycline
Experimental method
ELECTRON MICROSCOPY
Resolution
2.2 Å

Loop

Sequence
UGAAUCCAUAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PIJ|1|a|U|158
9PIJ|1|a|G|159
9PIJ|1|a|A|160
9PIJ|1|a|A|161
9PIJ|1|a|U|162
9PIJ|1|a|C|163
9PIJ|1|a|C|164
9PIJ|1|a|A|165
9PIJ|1|a|U|166
9PIJ|1|a|A|167
9PIJ|1|a|G|168

Current chains

Chain a
23S rRNA

Nearby chains

Chain w
50S ribosomal protein L28

Coloring options:

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