HL_9PJ8_007

3D structure

PDB id

9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Sarecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GACUGAGAUACGGC

Length

14 nucleotides

Bulged bases

9PJ8|1|A|U|330

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ8|1|A|G|322
9PJ8|1|A|A|323
9PJ8|1|A|C|324
9PJ8|1|A|U|325
9PJ8|1|A|G|326
9PJ8|1|A|A|327
9PJ8|1|A|G|328
9PJ8|1|A|A|329
9PJ8|1|A|U|330
9PJ8|1|A|A|331
9PJ8|1|A|C|332
9PJ8|1|A|G|333
9PJ8|1|A|G|334
9PJ8|1|A|C|335

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20