HL_9PJ8_070

3D structure

PDB id

9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Sarecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUGAUGGUUGUC

Length

12 nucleotides

Bulged bases

9PJ8|1|a|A|1634, 9PJ8|1|a|U|1635

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ8|1|a|G|1631
9PJ8|1|a|U|1632
9PJ8|1|a|G|1633
9PJ8|1|a|A|1634
9PJ8|1|a|U|1635
9PJ8|1|a|G|1636
9PJ8|1|a|G|1637
9PJ8|1|a|U|1638
9PJ8|1|a|U|1639
9PJ8|1|a|G|1640
9PJ8|1|a|U|1641
9PJ8|1|a|C|1642

Current chains

Chain a

23S rRNA

Nearby chains

Chain m

Large ribosomal subunit protein bL17